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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | ybaN |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ybaN | ybxG | - | 159778..160542 | COG0726 |
| Operon evidence: | transcription upstream and downstream of ybaN proceeds in the opposite direction |
|---|---|
| Reference: | Eichenberger P, et al. (2003) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | -35:+9 | 160572..160615 | TCGGTTATATTCAATTGTCCATGCTCATAAGATGTAAAACAAGA |
Eichenberger P, et al. (2003): AR, 5'-RACE-PCR |
| SpoIIID | Negative | ND | ND | ND |
Eichenberger P, et al. (2004): GS AR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CAAATGTTTTCTTAGAGGACTGCTTTTGCTTTATATAA >>>>>> <<<<<< |
ybaN |
|