Regulated Operon: ydbM

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
ydbM
+ 504713..505858
COG1960  

Operon evidence: Genome analysis; downstream gene is on the opposite strand
Reference:
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
YrzC Negative ND 504649..504712 AAAAATGGCAGGAAATCTATAATACATATTAAATTTATCGGAATTAAAACTGGGGGGCTGCCGG Even S, et al. (2006): GS HM AR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TTGAGTCATAAAAAAAAGAGCCTTACCGGCTCTTTTTATGTATTGTT
                 >>>>>     <<<<<
505865..505879
7..21
-9.5
ydbM

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai