Regulated Operon: ydcC

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
ydcC
+ 515697..516818
COG2834  

Operon evidence: Genome analysis
Reference: Genbank AB001488
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigE Promoter -40:+9 515636..515684 GTCTGCATATTAGGGAAACCCCACTCATATATTTGATAGTGCATTAAGG Kuwana R, et al. (2002): RG
Eichenberger P, et al. (2003): AR, 5'-RACE-PCR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CCAAAGGCCAAACATGATTTGGCCTTTTTTTCGTTAGAC
     >>>>>>>     <<<<<<<
516827..516845
9..27
-11.5
ydcC

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai