Regulated Operon: ydhU

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
ydhU
- 633470..633925
COG3546  

Operon evidence: upstream and downstream coding regions are on the opposite strand
Reference: Baichoo N, et al. (2002), Genbank AB001488
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
Fur Negative ND 633971..634020 AAGCGGTTAAACATGCTAATCCTCATCATTATATTATTGGAGCGCAAAGT Baichoo N, et al. (2002): FT

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
GGGAAGGTGCTCAAGAAACTTCTTGAGCACCTTCTTAATTGTGACA
     >>>>>>>>>>>    <<<<<<<<<<<
633433..633458
12..37
-20.9
ydhU

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai