Regulated Operon: yjbX

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yjbX cotO + 1247977..1248660

 

Operon evidence: downstream gene is in the opposite direction
Reference:
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigE Promoter -39:+10 1247921..1247969 TTTCTTCTGATTTTCAGCTTTCTGTCATATAGATAGAATATGACACAAT Eichenberger P, et al. (2003): AR, 5'-RACE-PCR
Feucht A, et al. (2003): AR DB RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGCTGCCCGGCTGATGTTGCCGGACAGCTTTTTTTACATAGAG
     >>>>>>>>>>       <<<<<<<<<<
1248675..1248701
15..41
-16.6
yjbX

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai