Regulated Operon: ykvW

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
ykvW zosA + 1450679..1452592
COG2217  

Operon evidence: Genome analysis
Reference: Gaballa A & Helmann JD (2002)
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
PerR Negative -75:-25 1450497..1450547 TAATGATAATTATTATCAAAAAGAAATTAAAATAATTATAATTGAAATTCT Gaballa A, et al. (2002): FT
SigA Promoter -38:+6 1450534..1450577 ATAATTGAAATTCTCTTCGTGCGTGCTATAATAAAGGAAGACAT Gaballa A & Helmann JD (2002): PE HB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
TAAAACCAGCAGCCTAATCAGGCTGCTGGCTTTTTATGTATCAAG
     >>>>>>>>>>    <<<<<<<<<<
1452595..1452618
3..26
-21.6
 ykvW

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai