Regulated Operon: ypuBC

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
ypuB
- 2433336..2433539

 
ypuC
- 2432969..2433358

 

Operon evidence: Genome analysis
Reference: Petersohn A, et al. (1999), Azevedo V, et al. (1993)
Comments: In a Northern blotting experiment, Azevedo found a 1.2 kb transcript covering ypuB and ypuC, but starting far upstream of ypuB.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigB Promoter ND 2433561..2433602 TGCTGATTATACAAAAAGTGGATTGGGAATGATAAAAGAACA Petersohn A, et al. (1999): HB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CGAGTGATGTTGCTGCGGGTTACGCCTTCGGCGGTGTTTGGCTGAGTTTGAATGTTTTGGT
  >>>>>>>>>>>>>>>>>>   <<<<<<<<<<<<<<<<<<<<
2432900..2432940
29..69
-16.5
ypuC

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai