Regulated Operon: yraGF-adhB-yraED

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yraG
+ 2752027..2752272

 
yraF
+ 2752290..2752658

 
adhB
+ 2752677..2753813 alcohol dehydrogenase COG1063 adhB-BAC-1 adhB-BAC-2  
yraE
+ 2753832..2754029

 
yraD
+ 2754045..2754344

 

Operon evidence: Genome analysis
Reference: Wang S, et al. (2006)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigG Promoter -39:+25 2751966..2752029 TTCTGTATGCTTCAACTTCATTTCGGGAAATGTAACGTTGATAAAAGGAGGTTACATCAATATG Wang S, et al. (2006): AR, Race-PCR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CAGCCGCTGTCGTTCGTCAGCCAGGATATTTTTTCGAGCTTCT
   >>>>>>        <<<<<<<<
2754760..2754781
416..437
-5.7
yraD

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai