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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yrrD |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yrrD | - | 2804931..2805455 | COG3881 |
| Operon evidence: | Genome analysis; downstream gene is on the opposite strand. |
|---|---|
| Reference: | Wang S, et al. (2006) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigG | Promoter | -39:+15 | 2805408..2805461 | CATCGTATGAGTCTAAGGCGCAAAGCAAAACCTAAGCCTGTTCAACAAAAGGTG |
Wang S, et al. (2006): AR, Race-PCR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TTTAATGCAAAAAGGATACTCTCCAAAGAGTATCCTTTTCTATGTTTGCC >>>>>>>>> <<<<<<<<< |
yrrD |
|