Regulated Operon: yvaB

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yvaB acpD - 3444472..3445107
COG1182 x0677-BAC  

Operon evidence: Genome analysis; downstream gene is on the opposite strand
Reference: Wang S, et al. (2006)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigG Promoter -38:+38 3445105..3445180 GACAGAATAATCATTATGCATCTGTATGATAATAATTGATGTGTGATTTTTAAAAACGAAAGGGCTGGTAAAAATG Wang S, et al. (2006): AR, Race-PCR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CTAATGAAAAAGCCTCCCCTTATTTGGGGAGGCTTTTGTTTTAGTGCT
           >>>>>>>>      <<<<<<<<
3444443..3444464
8..29
-18.7
yvaB

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai