Regulated Operon: yvdQ

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yvdQ
- 3541209..3541721

x1284-BAC  

Operon evidence: Genome analysis; downstream genes are on the opposite strand
Reference: Wang S, et al. (2006)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigG Promoter -39:+34 3541719..3541791 GAAACATAAATGTTCCTCCGCTTGGGCACGTTATGAAATGTGCAATATTGAATATGGGAGGAGAATGAGCATG Wang S, et al. (2006): AR, Race-PCR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CGAATCCAACAGTCATCACAATGATCGGCCATTTTTTTCTTGTTCC
           >>>>>>>   <<<<<<<<
3540942..3540959
250..267
-5.5
yvdQ

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai