Regulated Operon: yxiM-deaD

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yxiM
- 4016526..4017674
COG2755  
deaD yxiN - 4015005..4016444 ATP-dependent RNA helicase COG0513 x0363-BAC ydbR-BAC  

Operon evidence: Northern blotting (2.7 kb transcript); downstream genes are on the opposite strand
Reference: Yoshida K, et al. (2000)
Comments: Internal promoter in front of deaD, leading to a 1.6 kb transcript. A short (500 bp) transcript was found at the beginning of yxiM.


Promoters

No Data

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
ATGAATGACCTGCTCCCAGTTAAAGGGGCAGGTCATTTTGCTGCTGGCTG
     >>>>>>>>>>>        <<<<<<<<<<<
4014971..4015000
5..34
-22.1
deaD

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai