Phylogenetic profile : SigK

Orthologous information of transcription factor. (Explanation of these marks.)
TF COG Orthologs
SigK-No ortholog data.

Orthologous information of regulated genes. (Explanation of these marks.)
Regulated operon Regulated gene Orthologs
cgeAB cgeA No ortholog data.
cgeCDE cgeC No ortholog data.
cotA cotA ++..........+++.++++*..++++**+..++++++.......++...
cotB cotB No ortholog data.
cotC cotC No ortholog data.
cotD cotD No ortholog data.
cotE cotE No ortholog data.
cotF cotF *+*...+...........................................
cotG cotG No ortholog data.
cotH cotH +...........+.....................................
cotM cotM *++...+......+++***+++++..+..+...+++*+++....++++.+
cotSA-cotS-ytxO cotSA No ortholog data.
cotT cotT No ortholog data.
cotVWX cotV No ortholog data.
cotVWX cotX No ortholog data.
cotYZ cotY No ortholog data.
cwlC cwlC **+...++....+++++++++++++*+**+++++++++..+++++*+.++
cwlH cwlH No ortholog data.
rnc-smc-ftsY ftsY ++++++++++++++++++++++++++++++++++++++**++++++++++
gerE gerE **++..++....+++++++*+.++.....+...*++++......++...+
gerPABCDEF gerPA No ortholog data.
spoIVCB-spoIIIC spoIVCB *++...++.....++.+++++.++.....++++.......+++.++++..
spoVFAB-asd-dapG-dapA spoVFA No ortholog data.
spoVK spoVK *+..........+*+*.......+.....+..+++.+.......++...+
sps spsA +++++++++++++++++++++.++++++++++++++++++...+++++++
sspG-yurS sspG No ortholog data.
tgl tgl No ortholog data.
yabG yabG No ortholog data.
ycsFGI-kipIAR-ycsK ycsK ++++++.+.....++++++++.++.+.+++..++++++......++....
ydgBA-cotP ydgB No ortholog data.
yfhP yfhP *++...++........+++++..+.+........................
yfnHGFED yfnE +++++++++++++++++++++.++++++++++++++++++...+++++++
yfnHGFED yfnH +++.........++++...++..+..++++..++++++......+++..+
yhcOP yhcO No ortholog data.
yhjR yhjR +++..............................++++.........++..
yitBA-yisZ yitB +++.........+++.++++++++..++++...+++++......++..++
yitCD yitC +.+..........................+..............++.+.+
yjcB-yjcZ-spoVIF yjcB No ortholog data.
yjcB-yjcZ-spoVIF yjcC No ortholog data.
yjcB-yjcZ-spoVIF yjcZ No ortholog data.
ykuD ykuD +*+.........+**++++.+.++...+++...++++.......++.+..
ykvPQ ykvP ++**..+*....*++....+..+++*..............++.+..+..+
++*...............................+...............
ylbDE ylbD No ortholog data.
ymaG ymaG No ortholog data.
yndL yndL +............++.....................+.............
yngK yngK +...............++++.........+.....+........++...+
yoaN yoaN *...................+........+...++.+.......+.....
yobW yobW No ortholog data.
yodHI yodH ++++++++....+++++++++++++++++++++++++++++++.++++++
ypqA ypqA No ortholog data.
yqfQ yqfQ No ortholog data.
yrkC yrkC ++...........++.+++++.++..++++++.+++++......+++++.
ysnD ysnD No ortholog data.
ytaA ytaA No ortholog data.
ytcC ytcC ++++++++....+++++++++.++++++++++++++++++...+++++++
ytlABCD ytlA +++..++.....+...++++..++++...+...+++++..++..++.+++
ywrJ ywrJ No ortholog data.
yxeE yxeE No ortholog data.




Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2005
Contact: Kenta Nakai