ComA alignment
| srfAA_2_compl | AAAATGGGTGAAAAGTTTCA-----TGCGGGATGCCGAAA-----GATTCCAGTT---------- |
| srfAA_1_compl | TTATTTACAGCAATATTTTT-----TGCGGGATGCCGCAA-----TCATTTCCAC---------- |
| rapC | ---------CTTCGGTTTAT-----TGCGTGCTCCCGAAA-----ACAAAGATTG---------- |
| degQ_compl | AAAAGTATGCAAAAAAGTCC-----TGCGTGACACCGCAA-----ATCTCAATAG---------- |
| gsiA | ---------TGCTTTTTTGT-----TGCGGTTAGCCGAAA-----TTCGACAATTGCGGTTATTT |
