AbrB

We searched for AbrB binding sites in the upstream region of orthologous genes using the Position-Specific Scoring Matrix for AbrB.

Transcription Factor Regulated gene organism position cis-element score
AbrB ftsA Bsu -81..-93 GTGTAACAAAAA 7.136430
AbrB ftsA Spy -125..-113 ATATAACAAAAA 6.427440
AbrB aprE Bsu -74..-62 CTATTACAATAA 6.315900
AbrB aprE Bha -151..-163 ATGTGAGAAAAA 6.664880
AbrB aprE Spn -207..-195 GTGTGCTAAAAA 6.429990
AbrB aprE Nos -251..-239 ATTTTAGAAAAA 6.890850
AbrB aprE Dra -79..-91 ATTTGACAAAAA 8.505090
AbrB yxbB Bsu -58..-46 GTTTTCTAAAAA 6.655960
AbrB yxbB Bha -235..-223 ATTGCACAAAAA 6.159500
AbrB yxbB Cac -17..-29 ATTTTCTAAAAA 6.869220
AbrB yxbB Spy -45..-57 CTTTTCTAAAAA 6.655960
AbrB yxbB Spn -63..-51 ATTTTAGAAAAA 6.890850
AbrB yxbB Sau -181..-193 CTTTTTCAAAAA 7.555830
AbrB yxbB Eco -200..-188 ATTTGTCATTAA 6.434790
AbrB yxbB Ecs -81..-93 ATGTTCCAGAAA 6.156980
AbrB yxbB Ype -131..-119 CTGTGCCAAAAT 6.327000
AbrB yxbB Pae -40..-52 CTGTATCAAAAA 6.480270
AbrB yxbB Hin -41..-53 ATATAACAAAAA 6.427440
AbrB yxbB jHp -60..-48 ATTTACCAAAAA 8.009320
AbrB yxbB Cje -186..-198 TTTTTACAAAAA 6.364300
AbrB yxbB Rpr -15..-3 ATTTAAGAAAAA 6.121100
AbrB yxbB Rco -127..-115 ATTTTTCATAAA 7.022980
AbrB yxbB Syn -46..-58 AGTGGACAAAAA 6.881150
AbrB yxbB Nos -32..-44 ATTTGCCAGAAA 6.542630
AbrB yxbB Aae -25..-13 AGTTTGCATAAA 6.213740
AbrB yxbB Fnu -91..-103 ATTTTATAAAAA 6.515400
AbrB comK Bsu -65..-53 GTTTTACAAAAA 8.211990
AbrB sigW Bsu -41..-53 ATTGGGCAAAAA 6.352930
AbrB sigW Bha -118..-130 CTTTAGCAAAAA 6.445430
AbrB sigW Pae -56..-44 ATTTGCGAATAA 6.656480
AbrB sigW Pmu -67..-79 CATTGACAAAAA 6.541710
AbrB sigW Rso -86..-74 ATTTTACAAGAA 6.187050
AbrB sigW Mlo -63..-51 GTTTACCAAAAA 7.796060
AbrB sigW Syn -168..-180 ATATTGCAAAAA 6.200380
AbrB hpr Cac -68..-56 ATTTGACAAAAA 8.505090
AbrB hpr Lla -108..-96 ATTTTAAAAAAA 6.156120
AbrB hpr Spn -43..-55 ATTTGACAGAAA 6.188810
AbrB hpr Sau -205..-217 CGGTTACATAAA 6.691480
AbrB hpr Lin -228..-216 ATTTCTCAAAAA 6.658690
AbrB hpr Cgl -148..-136 ATTTTCCAATAA 8.111040
AbrB hpr Eco -65..-77 GTTTTAGAAAAA 6.677590
AbrB hpr EcZ -65..-77 GTTTTAGAAAAA 6.677590
AbrB hpr Ecs -65..-77 GTTTTAGAAAAA 6.677590
AbrB hpr Ype -178..-190 GTTTTATAAAAA 6.302140
AbrB hpr Sty -99..-111 AGTTACCAACAA 6.151090
AbrB hpr Hin -41..-53 ATTTTACAAAAA 8.425250
AbrB hpr Atu -153..-165 ATTTGTCAATAA 7.180900
AbrB hpr Bme -48..-60 ATTTTACAAAAT 6.412410
AbrB hpr Ccr -53..-65 CGTTCCCAATAA 6.318790
AbrB hpr Syn -45..-33 ATTGGCCAAAAA 7.703560
AbrB hpr Cac -68..-56 ATTTGACAAAAA 8.505090
AbrB hpr Lla -108..-96 ATTTTAAAAAAA 6.156120
AbrB hpr Spn -43..-55 ATTTGACAGAAA 6.188810
AbrB hpr Sau -205..-217 CGGTTACATAAA 6.691480
AbrB hpr Lin -228..-216 ATTTCTCAAAAA 6.658690
AbrB hpr Cgl -148..-136 ATTTTCCAATAA 8.111040
AbrB hpr Eco -65..-77 GTTTTAGAAAAA 6.677590
AbrB hpr EcZ -65..-77 GTTTTAGAAAAA 6.677590
AbrB hpr Ecs -65..-77 GTTTTAGAAAAA 6.677590
AbrB hpr Ype -178..-190 GTTTTATAAAAA 6.302140
AbrB hpr Sty -99..-111 AGTTACCAACAA 6.151090
AbrB hpr Hin -41..-53 ATTTTACAAAAA 8.425250
AbrB hpr Atu -153..-165 ATTTGTCAATAA 7.180900
AbrB hpr Bme -48..-60 ATTTTACAAAAT 6.412410
AbrB hpr Ccr -53..-65 CGTTCCCAATAA 6.318790
AbrB hpr Syn -45..-33 ATTGGCCAAAAA 7.703560
AbrB spoVG Cac -24..-36 ATTTTAGAATAA 6.222820
AbrB ycnK Cac -106..-118 AGTTACCAACAA 6.151090
AbrB ycnK Lla -16..-28 CGTTTACAAAAA 7.743400
AbrB ycnK Spy -136..-148 CGTTTACAATAA 7.075370
AbrB ycnK Sau -52..-40 AAGTGACAAAAA 6.449160
AbrB ycnK Lin -12..-24 CTTTGGCAAAAA 7.295020
AbrB ycnK Mlo -50..-62 CTCTACCAAAAA 6.491120
AbrB ycnK Nos -32..-20 GTTTGATAAAAA 6.381980
AbrB kinB Bsu -41..-29 ATGGTACAATAA 6.296060
AbrB kinB Bha -23..-35 GTTGAACAAAAA 6.286890
AbrB kinB Cac -24..-12 ATTTTATAAAAA 6.515400
AbrB kinB Spy -146..-158 ATTTGACAATAA 7.837060
AbrB kinB Spn -9..-21 CTTTGATAAAAA 6.381980
AbrB kinB Sau -188..-200 ATTTTATAAAAA 6.515400
AbrB kinB Cgl -249..-237 AGTTGCGAATAA 6.187890
AbrB kinB Eco -106..-118 AGGGGCCATAAA 6.183050
AbrB kinB EcZ -107..-119 AGGGGCCATAAA 6.183050
AbrB kinB Ecs -107..-119 AGGGGCCATAAA 6.183050
AbrB kinB Ype -208..-220 CTTTGTCAATAA 6.967640
AbrB kinB Sty -52..-64 CGTTGACAATAA 7.155210
AbrB kinB Syn -45..-57 AGATGACAATAA 6.140410
AbrB kinB Nos -80..-92 CTTTAACAAAAA 7.442240
AbrB kinB Aae -72..-60 AGGTGTCAAAAA 7.074530
AbrB abrB Bsu -174..-186 TTTTTACAAAAA 6.364300
AbrB abrB Cac -28..-16 ATTTTACATAAA 7.679140
AbrB abrB Nos -268..-256 CGTGACCAAAAA 6.172120
AbrB yocH Bsu -186..-198 AGGTGACAAAAA 7.730690
AbrB yocH Bha -139..-151 ATGAGACAAAAA 6.309200
AbrB yocH Cac -247..-235 AGCTTCCATAAA 6.259430
AbrB yocH Lla -209..-221 ATTTGCAAAAAA 6.589780
AbrB yocH Lin -220..-208 CTTGGACAAAAA 7.136480
AbrB yocH Bsu -186..-198 AGGTGACAAAAA 7.730690
AbrB yocH Bha -139..-151 ATGAGACAAAAA 6.309200
AbrB yocH Cac -247..-235 AGCTTCCATAAA 6.259430
AbrB yocH Lla -209..-221 ATTTGCAAAAAA 6.589780
AbrB yocH Lin -220..-208 CTTGGACAAAAA 7.136480
AbrB yxbC Bsu -58..-46 CTTTTAGAAAAA 6.677590
AbrB yxbC Sty -62..-74 TTTTGCCAATAA 6.129930
AbrB rbsR Bsu -66..-54 ATTTGTGAAAAA 6.314530
AbrB rbsR Bha -237..-225 GTGTTACATAAA 7.160070
AbrB rbsR Cac -219..-207 ATTTGTCAATAA 7.180900
AbrB rbsR Lla -50..-38 GGTTTTCATAAA 6.341130
AbrB rbsR Spy -96..-108 AGTTTTCAAAAA 7.300500
AbrB rbsR Spn -38..-50 GTTTTCGATAAA 6.285300
AbrB rbsR Lin -176..-188 CGTTACCAAAAA 7.327470
AbrB argC Nos -171..-183 ATAGGACAAAAA 6.121680
AbrB pbpE Bsu -110..-98 ATTTTGCAAAAA 7.428440
AbrB pbpE Lla -70..-58 ATTTTAAAAAAA 6.156120
AbrB pbpE EcZ -4..-16 GGTGTCCATAAA 6.195760
AbrB pbpE Ecs -4..-16 GGTGTCCATAAA 6.195760
AbrB pbpE Hin -44..-56 ATTTTAGAAAAA 6.890850
AbrB pbpE Mlo -28..-16 CGTTTCCAACAA 6.707580
AbrB pbpE Syn -151..-163 ATTTGCCAAAAC 6.279910
AbrB citB Xfa -196..-208 GTATGTCAAAAA 6.407610
AbrB citB Fnu -41..-53 ATTTTCTAAAAA 6.869220