We searched for AhrC binding sites in the upstream region of orthologous genes using the Position-Specific Scoring Matrix for AhrC.
| AhrC |
argC |
Bsu |
-80..-92 |
ATTTTTATTCAT |
10.039910 |
| AhrC |
argC |
Cac |
-129..-117 |
AATTTTATTGAT |
6.642820 |
| AhrC |
argC |
Lla |
-19..-31 |
ATTTTTATACAC |
7.137960 |
| AhrC |
argC |
Mle |
-22..-10 |
ATAATTATTCAT |
6.068320 |
| AhrC |
argC |
Eco |
-126..-114 |
ATCAATATTCAT |
6.298360 |
| AhrC |
argC |
EcZ |
-126..-114 |
ATCAATATTCAT |
6.298360 |
| AhrC |
argC |
Ecs |
-126..-114 |
ATCAATATTCAT |
6.298360 |
| AhrC |
argC |
Ype |
-218..-206 |
ATCAATATTCAT |
6.298360 |
| AhrC |
argC |
Nos |
-234..-246 |
ATTTTTATTCAC |
8.150340 |
| AhrC |
rocD |
Eco |
-64..-52 |
TTTTTTATGCAT |
7.137960 |
| AhrC |
rocD |
EcZ |
-64..-52 |
TTTTTTATGCAT |
7.137960 |
| AhrC |
rocD |
Ecs |
-217..-205 |
TTTTTTATTCTT |
6.945510 |
| AhrC |
rocD |
Pmu |
-79..-67 |
ATATTTATTCAT |
8.150340 |
| AhrC |
rocD |
Bme |
-271..-283 |
TTTTATATTCAC |
6.125580 |
| AhrC |
rocD |
Nos |
-68..-80 |
ATTTTTATTTAT |
7.655200 |
| AhrC |
rocA |
Bsu |
-50..-38 |
ATTTTTATTCAT |
10.039910 |
| AhrC |
rocA |
Bha |
-135..-123 |
ATTTTTAATCAT |
7.957890 |
| AhrC |
rocA |
Lla |
-158..-146 |
TTTTTTCTTCAG |
6.298360 |
| AhrC |
rocA |
Spn |
-126..-114 |
ATTTTTATTGAG |
7.008050 |
| AhrC |
rocA |
Eco |
-152..-140 |
ATTTTTATAAAT |
7.520010 |
| AhrC |
rocA |
EcZ |
-47..-35 |
AATATTATTCAT |
6.945510 |
| AhrC |
rocA |
Ecs |
-47..-35 |
AATATTATTCAT |
6.945510 |
| AhrC |
rocA |
Ype |
-52..-40 |
TTTTATATACAG |
6.355620 |
| AhrC |
rocA |
Sty |
-193..-181 |
ATTTTTATTCTG |
7.310740 |
| AhrC |
rocA |
Pae |
-146..-134 |
ATTTTTAATAAT |
6.450370 |
| AhrC |
rocA |
Pmu |
-43..-55 |
AATTATATTCAA |
6.125580 |
| AhrC |
rocA |
Nme |
-91..-79 |
ATTTTTGTTAAT |
6.450370 |
| AhrC |
rocA |
Atu |
-83..-95 |
ATTTTTATGCGT |
6.068320 |
| AhrC |
rocA |
Syn |
-205..-193 |
ATCTATAATCAT |
6.298360 |
| AhrC |
rocA |
Aae |
-6..-18 |
AATTTTATTAAG |
6.872860 |
| AhrC |
rocA |
Fnu |
-98..-86 |
TTTTTTATTTAT |
6.642820 |