We searched for IolR binding sites in the upstream region of orthologous genes using the Position-Specific Scoring Matrix for IolR.
IolR |
iolR |
Bsu |
-264..-248 |
ACCATTTCATGCACAA |
6.239740 |
IolR |
iolR |
Cac |
-103..-119 |
AACAATGTATTCACTA |
6.642380 |
IolR |
iolR |
Lla |
-78..-94 |
TCCAAAAAAAACTCAA |
6.239740 |
IolR |
iolR |
Spy |
-22..-6 |
ATCAAAACGAAAACAA |
6.206670 |
IolR |
iolR |
Spn |
-164..-148 |
TCCAATACTTACTCAA |
6.239740 |
IolR |
iolR |
Lin |
-52..-68 |
CCCAAAAAAATAACAA |
6.340760 |
IolR |
iolR |
Ecs |
-48..-32 |
ACCAATGGTCCCCCTT |
6.138720 |
IolR |
iolR |
Sty |
-182..-166 |
ACCACAAAGGTCACAA |
6.239740 |
IolR |
iolR |
Vch |
-234..-250 |
ATCAAAATAATCACAA |
6.105650 |
IolR |
iolR |
Rso |
-80..-96 |
AACAAAAGACGCGCAA |
6.105650 |
IolR |
iolR |
Nos |
-35..-19 |
ACCAACTAACCAACCA |
6.671430 |