We searched for Mta binding sites in the upstream region of orthologous genes using the Position-Specific Scoring Matrix for Mta.
| Mta |
ydfK |
Bsu |
-62..-48 |
GACTCTCTACTAAC |
7.177990 |
| Mta |
blt |
Bsu |
-8..-22 |
GCCTCTCCCCTATG |
7.708480 |
| Mta |
blt |
Bha |
-191..-177 |
GACACGAACGTAAC |
7.481460 |
| Mta |
blt |
Cac |
-65..-51 |
GACTTTAACGTAAC |
8.878940 |
| Mta |
blt |
Spn |
-119..-133 |
GTCTTTTCCGTAGC |
7.409490 |
| Mta |
blt |
Lin |
-20..-34 |
GACTCTATAGTTAC |
7.347370 |
| Mta |
blt |
Cgl |
-201..-187 |
AACCATACCCAAGC |
6.952950 |
| Mta |
blt |
Mtu |
-122..-136 |
GACGCGACCGTGGC |
7.874250 |
| Mta |
blt |
MtC |
-107..-121 |
GTCTCGACCGTACC |
7.078820 |
| Mta |
blt |
Eco |
-2..-16 |
GTCCCTCCCGTCAG |
7.675820 |
| Mta |
blt |
EcZ |
-33..-47 |
AACACTCCCGTTAC |
7.351980 |
| Mta |
blt |
Ecs |
-160..-174 |
AACTCGCCCGTAAC |
7.518730 |
| Mta |
blt |
Ype |
-63..-77 |
GACTATACCGTACA |
7.844790 |
| Mta |
blt |
Sty |
-266..-252 |
GGCTATCCCGTGGC |
8.342620 |
| Mta |
blt |
Pae |
-54..-68 |
GACCAGCCGGTCGG |
7.110040 |
| Mta |
blt |
Pmu |
-16..-30 |
TACTCTCTGGTAGC |
7.781040 |
| Mta |
blt |
Rso |
-104..-90 |
GACGCTAACGTAAA |
7.347370 |
| Mta |
blt |
Cje |
-134..-148 |
GACCCCAACGCTGC |
7.514530 |
| Mta |
blt |
Atu |
-29..-15 |
GACCCGCCCATGGC |
7.207450 |
| Mta |
blt |
Sme |
-269..-255 |
GACACGACCGTTAC |
7.946220 |
| Mta |
blt |
Mlo |
-160..-146 |
GGCCCTCCGCGAGG |
7.175770 |
| Mta |
blt |
Ccr |
-74..-60 |
CACTCTTCCGTCGC |
7.381030 |
| Mta |
blt |
Rco |
-269..-255 |
GATTGTCACGTAGC |
7.384640 |
| Mta |
blt |
Nos |
-92..-106 |
GACCCTAAGGTAAT |
8.212140 |
| Mta |
blt |
Dra |
-84..-98 |
GTCTCTCCCCTCGC |
8.739020 |
| Mta |
blt |
Bsu |
-8..-22 |
GCCTCTCCCCTATG |
7.708480 |
| Mta |
blt |
Bha |
-191..-177 |
GACACGAACGTAAC |
7.481460 |
| Mta |
blt |
Cac |
-65..-51 |
GACTTTAACGTAAC |
8.878940 |
| Mta |
blt |
Spn |
-119..-133 |
GTCTTTTCCGTAGC |
7.409490 |
| Mta |
blt |
Lin |
-20..-34 |
GACTCTATAGTTAC |
7.347370 |
| Mta |
blt |
Cgl |
-201..-187 |
AACCATACCCAAGC |
6.952950 |
| Mta |
blt |
Mtu |
-122..-136 |
GACGCGACCGTGGC |
7.874250 |
| Mta |
blt |
MtC |
-107..-121 |
GTCTCGACCGTACC |
7.078820 |
| Mta |
blt |
Eco |
-2..-16 |
GTCCCTCCCGTCAG |
7.675820 |
| Mta |
blt |
EcZ |
-33..-47 |
AACACTCCCGTTAC |
7.351980 |
| Mta |
blt |
Ecs |
-160..-174 |
AACTCGCCCGTAAC |
7.518730 |
| Mta |
blt |
Ype |
-63..-77 |
GACTATACCGTACA |
7.844790 |
| Mta |
blt |
Sty |
-266..-252 |
GGCTATCCCGTGGC |
8.342620 |
| Mta |
blt |
Pae |
-54..-68 |
GACCAGCCGGTCGG |
7.110040 |
| Mta |
blt |
Pmu |
-16..-30 |
TACTCTCTGGTAGC |
7.781040 |
| Mta |
blt |
Rso |
-104..-90 |
GACGCTAACGTAAA |
7.347370 |
| Mta |
blt |
Cje |
-134..-148 |
GACCCCAACGCTGC |
7.514530 |
| Mta |
blt |
Atu |
-29..-15 |
GACCCGCCCATGGC |
7.207450 |
| Mta |
blt |
Sme |
-269..-255 |
GACACGACCGTTAC |
7.946220 |
| Mta |
blt |
Mlo |
-160..-146 |
GGCCCTCCGCGAGG |
7.175770 |
| Mta |
blt |
Ccr |
-74..-60 |
CACTCTTCCGTCGC |
7.381030 |
| Mta |
blt |
Rco |
-269..-255 |
GATTGTCACGTAGC |
7.384640 |
| Mta |
blt |
Nos |
-92..-106 |
GACCCTAAGGTAAT |
8.212140 |
| Mta |
blt |
Dra |
-84..-98 |
GTCTCTCCCCTCGC |
8.739020 |
| Mta |
blt |
Bsu |
-8..-22 |
GCCTCTCCCCTATG |
7.708480 |
| Mta |
blt |
Bha |
-191..-177 |
GACACGAACGTAAC |
7.481460 |
| Mta |
blt |
Cac |
-65..-51 |
GACTTTAACGTAAC |
8.878940 |
| Mta |
blt |
Spn |
-119..-133 |
GTCTTTTCCGTAGC |
7.409490 |
| Mta |
blt |
Lin |
-20..-34 |
GACTCTATAGTTAC |
7.347370 |
| Mta |
blt |
Cgl |
-201..-187 |
AACCATACCCAAGC |
6.952950 |
| Mta |
blt |
Mtu |
-122..-136 |
GACGCGACCGTGGC |
7.874250 |
| Mta |
blt |
MtC |
-107..-121 |
GTCTCGACCGTACC |
7.078820 |
| Mta |
blt |
Eco |
-2..-16 |
GTCCCTCCCGTCAG |
7.675820 |
| Mta |
blt |
EcZ |
-33..-47 |
AACACTCCCGTTAC |
7.351980 |
| Mta |
blt |
Ecs |
-160..-174 |
AACTCGCCCGTAAC |
7.518730 |
| Mta |
blt |
Ype |
-63..-77 |
GACTATACCGTACA |
7.844790 |
| Mta |
blt |
Sty |
-266..-252 |
GGCTATCCCGTGGC |
8.342620 |
| Mta |
blt |
Pae |
-54..-68 |
GACCAGCCGGTCGG |
7.110040 |
| Mta |
blt |
Pmu |
-16..-30 |
TACTCTCTGGTAGC |
7.781040 |
| Mta |
blt |
Rso |
-104..-90 |
GACGCTAACGTAAA |
7.347370 |
| Mta |
blt |
Cje |
-134..-148 |
GACCCCAACGCTGC |
7.514530 |
| Mta |
blt |
Atu |
-29..-15 |
GACCCGCCCATGGC |
7.207450 |
| Mta |
blt |
Sme |
-269..-255 |
GACACGACCGTTAC |
7.946220 |
| Mta |
blt |
Mlo |
-160..-146 |
GGCCCTCCGCGAGG |
7.175770 |
| Mta |
blt |
Ccr |
-74..-60 |
CACTCTTCCGTCGC |
7.381030 |
| Mta |
blt |
Rco |
-269..-255 |
GATTGTCACGTAGC |
7.384640 |
| Mta |
blt |
Nos |
-92..-106 |
GACCCTAAGGTAAT |
8.212140 |
| Mta |
blt |
Dra |
-84..-98 |
GTCTCTCCCCTCGC |
8.739020 |
| Mta |
blt |
Bsu |
-8..-22 |
GCCTCTCCCCTATG |
7.708480 |
| Mta |
blt |
Bha |
-191..-177 |
GACACGAACGTAAC |
7.481460 |
| Mta |
blt |
Cac |
-65..-51 |
GACTTTAACGTAAC |
8.878940 |
| Mta |
blt |
Spn |
-119..-133 |
GTCTTTTCCGTAGC |
7.409490 |
| Mta |
blt |
Lin |
-20..-34 |
GACTCTATAGTTAC |
7.347370 |
| Mta |
blt |
Cgl |
-201..-187 |
AACCATACCCAAGC |
6.952950 |
| Mta |
blt |
Mtu |
-122..-136 |
GACGCGACCGTGGC |
7.874250 |
| Mta |
blt |
MtC |
-107..-121 |
GTCTCGACCGTACC |
7.078820 |
| Mta |
blt |
Eco |
-2..-16 |
GTCCCTCCCGTCAG |
7.675820 |
| Mta |
blt |
EcZ |
-33..-47 |
AACACTCCCGTTAC |
7.351980 |
| Mta |
blt |
Ecs |
-160..-174 |
AACTCGCCCGTAAC |
7.518730 |
| Mta |
blt |
Ype |
-63..-77 |
GACTATACCGTACA |
7.844790 |
| Mta |
blt |
Sty |
-266..-252 |
GGCTATCCCGTGGC |
8.342620 |
| Mta |
blt |
Pae |
-54..-68 |
GACCAGCCGGTCGG |
7.110040 |
| Mta |
blt |
Pmu |
-16..-30 |
TACTCTCTGGTAGC |
7.781040 |
| Mta |
blt |
Rso |
-104..-90 |
GACGCTAACGTAAA |
7.347370 |
| Mta |
blt |
Cje |
-134..-148 |
GACCCCAACGCTGC |
7.514530 |
| Mta |
blt |
Atu |
-29..-15 |
GACCCGCCCATGGC |
7.207450 |
| Mta |
blt |
Sme |
-269..-255 |
GACACGACCGTTAC |
7.946220 |
| Mta |
blt |
Mlo |
-160..-146 |
GGCCCTCCGCGAGG |
7.175770 |
| Mta |
blt |
Ccr |
-74..-60 |
CACTCTTCCGTCGC |
7.381030 |
| Mta |
blt |
Rco |
-269..-255 |
GATTGTCACGTAGC |
7.384640 |
| Mta |
blt |
Nos |
-92..-106 |
GACCCTAAGGTAAT |
8.212140 |
| Mta |
blt |
Dra |
-84..-98 |
GTCTCTCCCCTCGC |
8.739020 |
| Mta |
mta |
Bsu |
-12..-26 |
GACTATACGGTAAC |
10.309490 |
| Mta |
mta |
Bha |
-55..-41 |
GACTCTCACGTTAC |
10.276830 |
| Mta |
mta |
Cac |
-65..-51 |
GACTTTAACGTAAC |
8.878940 |
| Mta |
mta |
Spn |
-49..-35 |
GACTCTGACCTAAG |
8.212140 |
| Mta |
mta |
Lin |
-20..-34 |
GACTCTATAGTTAC |
7.347370 |
| Mta |
mta |
Mtu |
-107..-121 |
GTCTCGACCGTACC |
7.078820 |
| Mta |
mta |
MtC |
-107..-121 |
GTCTCGACCGTACC |
7.078820 |
| Mta |
mta |
Ype |
-11..-25 |
GACCTTCACCTTGC |
8.575880 |
| Mta |
mta |
Rso |
-104..-90 |
GACGCTAACGTAAA |
7.347370 |
| Mta |
mta |
Mlo |
-54..-68 |
GAACCAACCCTTGC |
7.417710 |
| Mta |
mta |
Ccr |
-55..-41 |
GACCCTCACGCCAC |
7.279420 |
| Mta |
mta |
Nos |
-22..-8 |
GACTCTACCCTTAG |
10.208470 |
| Mta |
bmr |
Bsu |
-104..-90 |
GACTATACGGTAAC |
10.309490 |
| Mta |
bmr |
Bha |
-55..-41 |
GACTCTCACGTTAC |
10.276830 |
| Mta |
bmr |
Cac |
-65..-51 |
GACTTTAACGTAAC |
8.878940 |
| Mta |
bmr |
Spn |
-119..-133 |
GTCTTTTCCGTAGC |
7.409490 |
| Mta |
bmr |
Lin |
-20..-34 |
GACTCTATAGTTAC |
7.347370 |
| Mta |
bmr |
Cgl |
-56..-42 |
GACTCTATGATTGG |
7.177990 |
| Mta |
bmr |
Mtu |
-107..-121 |
GTCTCGACCGTACC |
7.078820 |
| Mta |
bmr |
MtC |
-107..-121 |
GTCTCGACCGTACC |
7.078820 |
| Mta |
bmr |
Eco |
-2..-16 |
GTCCCTCCCGTCAG |
7.675820 |
| Mta |
bmr |
EcZ |
-33..-47 |
AACACTCCCGTTAC |
7.351980 |
| Mta |
bmr |
Ecs |
-160..-174 |
AACTCGCCCGTAAC |
7.518730 |
| Mta |
bmr |
Ype |
-63..-77 |
GACTATACCGTACA |
7.844790 |
| Mta |
bmr |
Sty |
-266..-252 |
GGCTATCCCGTGGC |
8.342620 |
| Mta |
bmr |
Pae |
-69..-83 |
GACTCTGCGGTCCC |
7.174380 |
| Mta |
bmr |
Pmu |
-16..-30 |
TACTCTCTGGTAGC |
7.781040 |
| Mta |
bmr |
Rso |
-104..-90 |
GACGCTAACGTAAA |
7.347370 |
| Mta |
bmr |
Mlo |
-78..-92 |
GACACTCCAGCAGC |
7.308470 |
| Mta |
bmr |
Ccr |
-74..-60 |
CACTCTTCCGTCGC |
7.381030 |
| Mta |
bmr |
Rco |
-269..-255 |
GATTGTCACGTAGC |
7.384640 |
| Mta |
bmr |
Nos |
-92..-106 |
GACCCTAAGGTAAT |
8.212140 |
| Mta |
bmr |
Dra |
-84..-98 |
GTCTCTCCCCTCGC |
8.739020 |
| Mta |
bmr |
Bsu |
-104..-90 |
GACTATACGGTAAC |
10.309490 |
| Mta |
bmr |
Bha |
-55..-41 |
GACTCTCACGTTAC |
10.276830 |
| Mta |
bmr |
Cac |
-65..-51 |
GACTTTAACGTAAC |
8.878940 |
| Mta |
bmr |
Spn |
-119..-133 |
GTCTTTTCCGTAGC |
7.409490 |
| Mta |
bmr |
Lin |
-20..-34 |
GACTCTATAGTTAC |
7.347370 |
| Mta |
bmr |
Cgl |
-56..-42 |
GACTCTATGATTGG |
7.177990 |
| Mta |
bmr |
Mtu |
-107..-121 |
GTCTCGACCGTACC |
7.078820 |
| Mta |
bmr |
MtC |
-107..-121 |
GTCTCGACCGTACC |
7.078820 |
| Mta |
bmr |
Eco |
-2..-16 |
GTCCCTCCCGTCAG |
7.675820 |
| Mta |
bmr |
EcZ |
-33..-47 |
AACACTCCCGTTAC |
7.351980 |
| Mta |
bmr |
Ecs |
-160..-174 |
AACTCGCCCGTAAC |
7.518730 |
| Mta |
bmr |
Ype |
-63..-77 |
GACTATACCGTACA |
7.844790 |
| Mta |
bmr |
Sty |
-266..-252 |
GGCTATCCCGTGGC |
8.342620 |
| Mta |
bmr |
Pae |
-69..-83 |
GACTCTGCGGTCCC |
7.174380 |
| Mta |
bmr |
Pmu |
-16..-30 |
TACTCTCTGGTAGC |
7.781040 |
| Mta |
bmr |
Rso |
-104..-90 |
GACGCTAACGTAAA |
7.347370 |
| Mta |
bmr |
Mlo |
-78..-92 |
GACACTCCAGCAGC |
7.308470 |
| Mta |
bmr |
Ccr |
-74..-60 |
CACTCTTCCGTCGC |
7.381030 |
| Mta |
bmr |
Rco |
-269..-255 |
GATTGTCACGTAGC |
7.384640 |
| Mta |
bmr |
Nos |
-92..-106 |
GACCCTAAGGTAAT |
8.212140 |
| Mta |
bmr |
Dra |
-84..-98 |
GTCTCTCCCCTCGC |
8.739020 |
| Mta |
bmr |
Bsu |
-104..-90 |
GACTATACGGTAAC |
10.309490 |
| Mta |
bmr |
Bha |
-55..-41 |
GACTCTCACGTTAC |
10.276830 |
| Mta |
bmr |
Cac |
-65..-51 |
GACTTTAACGTAAC |
8.878940 |
| Mta |
bmr |
Spn |
-119..-133 |
GTCTTTTCCGTAGC |
7.409490 |
| Mta |
bmr |
Lin |
-20..-34 |
GACTCTATAGTTAC |
7.347370 |
| Mta |
bmr |
Cgl |
-56..-42 |
GACTCTATGATTGG |
7.177990 |
| Mta |
bmr |
Mtu |
-107..-121 |
GTCTCGACCGTACC |
7.078820 |
| Mta |
bmr |
MtC |
-107..-121 |
GTCTCGACCGTACC |
7.078820 |
| Mta |
bmr |
Eco |
-2..-16 |
GTCCCTCCCGTCAG |
7.675820 |
| Mta |
bmr |
EcZ |
-33..-47 |
AACACTCCCGTTAC |
7.351980 |
| Mta |
bmr |
Ecs |
-160..-174 |
AACTCGCCCGTAAC |
7.518730 |
| Mta |
bmr |
Ype |
-63..-77 |
GACTATACCGTACA |
7.844790 |
| Mta |
bmr |
Sty |
-266..-252 |
GGCTATCCCGTGGC |
8.342620 |
| Mta |
bmr |
Pae |
-69..-83 |
GACTCTGCGGTCCC |
7.174380 |
| Mta |
bmr |
Pmu |
-16..-30 |
TACTCTCTGGTAGC |
7.781040 |
| Mta |
bmr |
Rso |
-104..-90 |
GACGCTAACGTAAA |
7.347370 |
| Mta |
bmr |
Mlo |
-78..-92 |
GACACTCCAGCAGC |
7.308470 |
| Mta |
bmr |
Ccr |
-74..-60 |
CACTCTTCCGTCGC |
7.381030 |
| Mta |
bmr |
Rco |
-269..-255 |
GATTGTCACGTAGC |
7.384640 |
| Mta |
bmr |
Nos |
-92..-106 |
GACCCTAAGGTAAT |
8.212140 |
| Mta |
bmr |
Dra |
-84..-98 |
GTCTCTCCCCTCGC |
8.739020 |
| Mta |
bmr |
Bsu |
-104..-90 |
GACTATACGGTAAC |
10.309490 |
| Mta |
bmr |
Bha |
-55..-41 |
GACTCTCACGTTAC |
10.276830 |
| Mta |
bmr |
Cac |
-65..-51 |
GACTTTAACGTAAC |
8.878940 |
| Mta |
bmr |
Spn |
-119..-133 |
GTCTTTTCCGTAGC |
7.409490 |
| Mta |
bmr |
Lin |
-20..-34 |
GACTCTATAGTTAC |
7.347370 |
| Mta |
bmr |
Cgl |
-56..-42 |
GACTCTATGATTGG |
7.177990 |
| Mta |
bmr |
Mtu |
-107..-121 |
GTCTCGACCGTACC |
7.078820 |
| Mta |
bmr |
MtC |
-107..-121 |
GTCTCGACCGTACC |
7.078820 |
| Mta |
bmr |
Eco |
-2..-16 |
GTCCCTCCCGTCAG |
7.675820 |
| Mta |
bmr |
EcZ |
-33..-47 |
AACACTCCCGTTAC |
7.351980 |
| Mta |
bmr |
Ecs |
-160..-174 |
AACTCGCCCGTAAC |
7.518730 |
| Mta |
bmr |
Ype |
-63..-77 |
GACTATACCGTACA |
7.844790 |
| Mta |
bmr |
Sty |
-266..-252 |
GGCTATCCCGTGGC |
8.342620 |
| Mta |
bmr |
Pae |
-69..-83 |
GACTCTGCGGTCCC |
7.174380 |
| Mta |
bmr |
Pmu |
-16..-30 |
TACTCTCTGGTAGC |
7.781040 |
| Mta |
bmr |
Rso |
-104..-90 |
GACGCTAACGTAAA |
7.347370 |
| Mta |
bmr |
Mlo |
-78..-92 |
GACACTCCAGCAGC |
7.308470 |
| Mta |
bmr |
Ccr |
-74..-60 |
CACTCTTCCGTCGC |
7.381030 |
| Mta |
bmr |
Rco |
-269..-255 |
GATTGTCACGTAGC |
7.384640 |
| Mta |
bmr |
Nos |
-92..-106 |
GACCCTAAGGTAAT |
8.212140 |
| Mta |
bmr |
Dra |
-84..-98 |
GTCTCTCCCCTCGC |
8.739020 |