match_sequences

Spo0A

We searched for Spo0A binding sites in the upstream region of orthologous genes using the Position-Specific Scoring Matrix for Spo0A.

Transcription Factor	Regulated gene	organism	position	cis-element	score
Spo0A	kinC	Bsu	-36..-29	`TGTCGAA`	`7.505960`
Spo0A	kinC	Bha	-19..-12	`TGACGAA`	`6.296440`
Spo0A	kinC	Cac	-152..-159	`TGACGAA`	`6.296440`
Spo0A	kinC	Mle	-109..-102	`TGTCGAA`	`7.505960`
Spo0A	kinC	Eco	-43..-36	`TGACGAA`	`6.296440`
Spo0A	kinC	EcZ	-43..-36	`TGACGAA`	`6.296440`
Spo0A	kinC	Ecs	-120..-113	`TGTCGAA`	`7.505960`
Spo0A	kinC	Pae	-61..-54	`TGACGAA`	`6.296440`
Spo0A	kinC	Xfa	-56..-63	`TGTCGAG`	`6.399930`
Spo0A	kinC	Rso	-111..-118	`TGTCGAA`	`7.505960`
Spo0A	kinC	Atu	-118..-111	`TGACGAA`	`6.296440`
Spo0A	kinC	Sme	-66..-59	`TGTCGAG`	`6.399930`
Spo0A	kinC	Mlo	-206..-199	`TGTCGAA`	`7.505960`
Spo0A	kinC	Ccr	-216..-223	`TGTCGAA`	`7.505960`
Spo0A	kinC	Rco	-165..-172	`TGACGAA`	`6.296440`
Spo0A	kinC	Syn	-57..-64	`TGACGAA`	`6.296440`
Spo0A	kinC	Nos	-60..-67	`TGACGAA`	`6.296440`
Spo0A	kinC	Fnu	-242..-235	`TGACGAA`	`6.296440`
Spo0A	kinC	Dra	-69..-62	`TGACGAA`	`6.296440`
Spo0A	kinC	Bsu	-36..-29	`TGTCGAA`	`7.505960`
Spo0A	kinC	Bha	-19..-12	`TGACGAA`	`6.296440`
Spo0A	kinC	Cac	-152..-159	`TGACGAA`	`6.296440`
Spo0A	kinC	Mle	-109..-102	`TGTCGAA`	`7.505960`
Spo0A	kinC	Eco	-43..-36	`TGACGAA`	`6.296440`
Spo0A	kinC	EcZ	-43..-36	`TGACGAA`	`6.296440`
Spo0A	kinC	Ecs	-120..-113	`TGTCGAA`	`7.505960`
Spo0A	kinC	Pae	-61..-54	`TGACGAA`	`6.296440`
Spo0A	kinC	Xfa	-56..-63	`TGTCGAG`	`6.399930`
Spo0A	kinC	Rso	-111..-118	`TGTCGAA`	`7.505960`
Spo0A	kinC	Atu	-118..-111	`TGACGAA`	`6.296440`
Spo0A	kinC	Sme	-66..-59	`TGTCGAG`	`6.399930`
Spo0A	kinC	Mlo	-206..-199	`TGTCGAA`	`7.505960`
Spo0A	kinC	Ccr	-216..-223	`TGTCGAA`	`7.505960`
Spo0A	kinC	Rco	-165..-172	`TGACGAA`	`6.296440`
Spo0A	kinC	Syn	-57..-64	`TGACGAA`	`6.296440`
Spo0A	kinC	Nos	-60..-67	`TGACGAA`	`6.296440`
Spo0A	kinC	Fnu	-242..-235	`TGACGAA`	`6.296440`
Spo0A	kinC	Dra	-69..-62	`TGACGAA`	`6.296440`
Spo0A	abrB	Bsu	-288..-281	`TGTCGAA`	`7.505960`
Spo0A	abrB	Bha	-59..-52	`TGTCGAA`	`7.505960`
Spo0A	dltA	Bsu	-197..-190	`TGTCGAA`	`7.505960`
Spo0A	dltA	MtC	-248..-255	`TGTCGAG`	`6.399930`
Spo0A	dltA	EcZ	-7..0	`TGACGAA`	`6.296440`
Spo0A	spoIIE	Pae	-58..-65	`TGTCGAA`	`7.505960`
Spo0A	kinA	Bsu	-36..-29	`TGTCGAA`	`7.505960`
Spo0A	kinA	Bha	-19..-12	`TGACGAA`	`6.296440`
Spo0A	kinA	Cac	-152..-159	`TGACGAA`	`6.296440`
Spo0A	kinA	Mle	-109..-102	`TGTCGAA`	`7.505960`
Spo0A	kinA	Eco	-43..-36	`TGACGAA`	`6.296440`
Spo0A	kinA	EcZ	-43..-36	`TGACGAA`	`6.296440`
Spo0A	kinA	Ecs	-120..-113	`TGTCGAA`	`7.505960`
Spo0A	kinA	Pae	-61..-54	`TGACGAA`	`6.296440`
Spo0A	kinA	Xfa	-56..-63	`TGTCGAG`	`6.399930`
Spo0A	kinA	Rso	-111..-118	`TGTCGAA`	`7.505960`
Spo0A	kinA	Atu	-118..-111	`TGACGAA`	`6.296440`
Spo0A	kinA	Sme	-66..-59	`TGTCGAG`	`6.399930`
Spo0A	kinA	Mlo	-206..-199	`TGTCGAA`	`7.505960`
Spo0A	kinA	Ccr	-216..-223	`TGTCGAA`	`7.505960`
Spo0A	kinA	Rco	-165..-172	`TGACGAA`	`6.296440`
Spo0A	kinA	Syn	-57..-64	`TGACGAA`	`6.296440`
Spo0A	kinA	Nos	-60..-67	`TGACGAA`	`6.296440`
Spo0A	kinA	Fnu	-242..-235	`TGACGAA`	`6.296440`
Spo0A	kinA	Dra	-69..-62	`TGACGAA`	`6.296440`
Spo0A	kinA	Bsu	-36..-29	`TGTCGAA`	`7.505960`
Spo0A	kinA	Bha	-19..-12	`TGACGAA`	`6.296440`
Spo0A	kinA	Cac	-152..-159	`TGACGAA`	`6.296440`
Spo0A	kinA	Mle	-109..-102	`TGTCGAA`	`7.505960`
Spo0A	kinA	Eco	-43..-36	`TGACGAA`	`6.296440`
Spo0A	kinA	EcZ	-43..-36	`TGACGAA`	`6.296440`
Spo0A	kinA	Ecs	-120..-113	`TGTCGAA`	`7.505960`
Spo0A	kinA	Pae	-61..-54	`TGACGAA`	`6.296440`
Spo0A	kinA	Xfa	-56..-63	`TGTCGAG`	`6.399930`
Spo0A	kinA	Rso	-111..-118	`TGTCGAA`	`7.505960`
Spo0A	kinA	Atu	-118..-111	`TGACGAA`	`6.296440`
Spo0A	kinA	Sme	-66..-59	`TGTCGAG`	`6.399930`
Spo0A	kinA	Mlo	-206..-199	`TGTCGAA`	`7.505960`
Spo0A	kinA	Ccr	-216..-223	`TGTCGAA`	`7.505960`
Spo0A	kinA	Rco	-165..-172	`TGACGAA`	`6.296440`
Spo0A	kinA	Syn	-57..-64	`TGACGAA`	`6.296440`
Spo0A	kinA	Nos	-60..-67	`TGACGAA`	`6.296440`
Spo0A	kinA	Fnu	-242..-235	`TGACGAA`	`6.296440`
Spo0A	kinA	Dra	-69..-62	`TGACGAA`	`6.296440`
Spo0A	spo0A	Bsu	-184..-191	`TGTCGAA`	`7.505960`
Spo0A	spo0A	Bha	-177..-184	`TGTCGAA`	`7.505960`
Spo0A	spo0A	Cac	-70..-63	`TGTCGAA`	`7.505960`
Spo0A	spo0A	Eco	-120..-113	`TGTCGAA`	`7.505960`
Spo0A	spo0A	EcZ	-120..-113	`TGTCGAA`	`7.505960`
Spo0A	spo0A	Ecs	-120..-113	`TGTCGAA`	`7.505960`
Spo0A	spo0A	Vch	-158..-151	`TGTCGAG`	`6.399930`
Spo0A	spo0A	Pae	-61..-54	`TGACGAA`	`6.296440`
Spo0A	spo0A	Xfa	-70..-63	`TGTCGAG`	`6.399930`
Spo0A	spo0A	Sme	-66..-59	`TGTCGAG`	`6.399930`
Spo0A	spo0A	Bme	-96..-103	`TGACGAA`	`6.296440`
Spo0A	spo0A	Mlo	-96..-103	`TGACGAA`	`6.296440`
Spo0A	spo0A	Ccr	-216..-223	`TGTCGAA`	`7.505960`
Spo0A	spo0A	Syn	-222..-215	`TGACGAA`	`6.296440`
Spo0A	spo0A	Nos	-34..-27	`TGACGAA`	`6.296440`
Spo0A	spo0F	Bsu	-184..-191	`TGTCGAA`	`7.505960`
Spo0A	spo0F	Bha	-177..-184	`TGTCGAA`	`7.505960`
Spo0A	spo0F	Cac	-70..-63	`TGTCGAA`	`7.505960`
Spo0A	spo0F	Eco	-120..-113	`TGTCGAA`	`7.505960`
Spo0A	spo0F	EcZ	-120..-113	`TGTCGAA`	`7.505960`
Spo0A	spo0F	Ecs	-120..-113	`TGTCGAA`	`7.505960`
Spo0A	spo0F	Vch	-158..-151	`TGTCGAG`	`6.399930`
Spo0A	spo0F	Pae	-61..-54	`TGACGAA`	`6.296440`
Spo0A	spo0F	Xfa	-70..-63	`TGTCGAG`	`6.399930`
Spo0A	spo0F	Sme	-66..-59	`TGTCGAG`	`6.399930`
Spo0A	spo0F	Bme	-96..-103	`TGACGAA`	`6.296440`
Spo0A	spo0F	Mlo	-96..-103	`TGACGAA`	`6.296440`
Spo0A	spo0F	Ccr	-216..-223	`TGTCGAA`	`7.505960`
Spo0A	spo0F	Syn	-222..-215	`TGACGAA`	`6.296440`
Spo0A	spo0F	Nos	-34..-27	`TGACGAA`	`6.296440`