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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | ackA |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| ackA | - | 3015111..3016298 | COG0282C | ackA-BAC ackA-STA ackA-STR |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Grundy FJ, et al. (1993) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| CcpA | Positive | -124:-110 | 3016499..3016513 | TGTAAGCGTTCATCA |
Grundy FJ, et al. (1993): DB DP |
| CcpA | Positive | -74:-41 | 3016430..3016463 | GACTTCTTATTGTAAGCGTTATCAATACGCAAGT |
Grundy FJ, et al. (1993): DB DP |
| SigA | Promoter | -44:+6 | 3016385..3016434 | CAAGTTGACTTGAAAAGCCGACATGACAATGTTTAAATGGAAAAGTCAGA |
Grundy FJ, et al. (1993): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TGAAAGCACATTCTCTTGAATGTGCTTTTTTGTTGATGCA >>>>>>>> <<<<<<<< |
ackA |
|