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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | amhX |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| amhX | - | 324038..325189 | COG1473R | amhX-BAC |
| Operon evidence: | Northern blotting (1.2 kb transcript); upstream and downstream genes are on the opposite strand |
|---|---|
| Reference: | Kempf B & Bremer E (1996), BSORF |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -42:+17 | 325250..325308 | TTAATTATTCTGAATAGTAGCAATATGTGCTATATTATATACAGCCTATCTTCCTGTTT |
Kempf B, et al. (1996): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGCAGCCTGACACAGGCTGCTTTTTTGATTACTTC >>>>>>>> <<<<<<<< |
amhX |
|