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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | aprX |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| aprX | - | 1861384..1862712 | COG1404O |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| LexA | Negative | -157:-134 | 1862873..1862896 | TAATACGAACAAACGTTCTTTTTC |
Au N, et al. (2005): GS AR DB |
| SigA | Promoter | -37:+12 | 1862727..1862775 | ACTTACCAAACCTATCATCTGTTCATAGAGTATACAGAGAACCTTATAA |
Valbuzzi A, et al. (1999): PE DP RG |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TTCCCGGCCAATAAACATCATCAAAAGCCGGCAATTCTCTCTCAGCAGAACTGCCGGTTTTTTCGTTTGAAT >>>>>>>>>>>>> <<<<<<<<<<<<<< |
aprX |
|