Regulated Operon: | arsR-yqcK-arsBC |
Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
---|---|---|---|---|---|---|
arsR | yqcJ | - | 2657317..2657634 | COG0640K | arsR-1-STA arsR-BAC x1277-BAC x1447-BAC x1694-BAC | |
yqcK | - | 2656816..2657256 | COG0346E | x1225-BAC | ||
arsB | yqcL | - | 2655753..2656793 | COG0798P | acr3-BAC | |
arsC | yqcM | - | 2655322..2655741 | COG0394T | arsC-BAC arsC-STA |
Operon evidence: | Northern blotting (2.4 (or 2.2) kb transcript) |
---|---|
Reference: | Sato T & Kobayashi Y (1998), Nguyen TT, et al. (2009) |
Comments: |
Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
---|---|---|---|---|---|
ArsR | Negative | -56:-39 | 2657706..2657723 | AAATAAATTGATTTATTT |
Sato T & Kobayashi Y (1998): DB |
SigA | Promoter | -50:+10 | 2657658..2657717 | ATTGATTTATTTGCTTGCATTAATTTAAAAATCATGAGTATAATAAATACATCAAAAAAA |
Sato T & Kobayashi Y (1998): PE HM |
Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
---|---|---|---|---|
TTAAAGGATGCATATTTATATGTGTCCTTTTTTTATTAATGT >>>>>>>>> <<<<<<<<< |
arsC |
|