Regulated Operon: citG

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
citG fumC - 3389024..3390412
COG0114C fumC-BAC fumC-STA fumC-BAC fumC-STA  

Operon evidence: upstream and downstream genes are in the opposite direction
Reference: Miles JS & Guest R (1985)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -50:+7 3390706..3390762 AAACCTTAGTAGAGGTTATCTTTTCCTGTTAAAAAAATGATATACTGTGTTAGAGTA Feavers IM, et al. (1988): S1
Tatti KM, et al. (1990): PE
Price VA, et al. (1990): DB
SigA Promoter -44:+7 3390692..3390742 TTTTCCTGTTAAAAAAATGATATACTGTGTTAGAGTATTTCATGGAGTAAG Feavers IM, et al. (1988): S1
Tatti KM, et al. (1990): PE
Price VA, et al. (1990): DB
SigH Promoter -43:+5 3390439..3390486 AAAAATAAAAAGGATTTTTTGTGTCATTGGCGAATTATGATCTATTGA Feavers IM, et al. (1988): S1 DB, fumarase activity
Tatti KM, et al. (1990): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAGAACGGCTGCTTTTTAAGCAGCCGTTCTTCTAAATATGT
     >>>>>>>>>   <<<<<<<<<
3388994..3389014
10..30
-16.9
citG

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai