Regulated Operon: | codV-clpQY-codY |
Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
---|---|---|---|---|---|---|
codV | + | 1687187..1688101 | COG4974L | codV-BAC | ||
clpQ | codW | + | 1688114..1688659 | COG5405O | hslV-BAC | |
clpY | codX | + | 1688676..1690079 | COG1220O | clpY-BAC clpY-STA | |
codY | + | 1690119..1690898 | COG4465K | codY-BAC codY-STA x0200-STR |
Operon evidence: | plasmid integrations and in-frame deletion mutations |
---|---|
Reference: | Slack FJ, et al. (1995) |
Comments: |
Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
---|---|---|---|---|---|
SigA | Promoter | -43:+6 | 1687120..1687168 | GTATTGATTGCAACCTGAGCGCGATTTGTGATACCATTTAAAAGCCCTT |
Slack FJ, et al. (1995): PE |
Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
---|---|---|---|---|
AAAAAGAACCCTTTTTGAGGGTTCTTTTTTTATTTCAAA >>>>>>>> <<<<<<<< |
codY |
|