Regulated Operon: des

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
des yocE + 2089396..2090454
COG3239I x0608-BAC  

Operon evidence: Northern blotting (1.1 kb transcript)
Reference: Aguilar PS, et al. (1999)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
YocG Negative -61:-45 2089307..2089323 TCATATAGGAGGCATGA Aguilar PS, et al. (2001): GS FT
SigA Promoter -43:+5 2089325..2089372 GTGTGCTACTACAAAAGACTTCTCTCATTAGCGTATACTGAACCGAGA Aguilar PS, et al. (1999): PE HM

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
ATAAAGGAGGTCTTCTAATATACTAGAAGGCTTCCTTTTTATTGTTGGAG
     >>>>>>>>>>>>      <<<<<<<<<<<<
2090462..2090491
8..37
-18.9
des

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai