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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | des |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| des | yocE | + | 2089396..2090454 | COG3239I | x0608-BAC |
| Operon evidence: | Northern blotting (1.1 kb transcript) |
|---|---|
| Reference: | Aguilar PS, et al. (1999) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| YocG | Negative | -61:-45 | 2089307..2089323 | TCATATAGGAGGCATGA |
Aguilar PS, et al. (2001): GS FT |
| SigA | Promoter | -43:+5 | 2089325..2089372 | GTGTGCTACTACAAAAGACTTCTCTCATTAGCGTATACTGAACCGAGA |
Aguilar PS, et al. (1999): PE HM |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| ATAAAGGAGGTCTTCTAATATACTAGAAGGCTTCCTTTTTATTGTTGGAG >>>>>>>>>>>> <<<<<<<<<<<< |
des |
|