Regulated Operon: ezrA

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
ezrA ytwP - 3029729..3031417
COG4477D ezrA-STR  

Operon evidence: Genome analysis; upstream and downstream gene are on the opposite strand
Reference: Lapidus A, et al. (1997), Genbank AF008220
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -58:+20 3031494..3031571 GCACAAAAAGTTTTTGATTTCTGGTCAAAAAATGTTTGTTACATGGTATCATAATAACAATGAAAACGACAGTTTTTC Chung KM, et al. (2004): PE RG
SigA Promoter -55:+20 3031469..3031543 AAAATGTTTGTTACATGGTATCATAATAACAATGAAAACGACAGTTTTTCTCAATACATATCCTGAAATCTTTCT Chung KM, et al. (2004): PE RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGAGCCCGCAGTGTAATGAGCAGGCTCTTTTTTTATTACAAA
     >>>>>>>>          <<<<<<<<
3029683..3029708
21..46
-11.7
ezrA

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai