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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | hpr |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| hpr | scoC, catA | - | 1073106..1073717 | COG1846K | hpr-BAC |
| Operon evidence: | Northern blotting (750 bp transcript); downstream gene is on the opposite strand |
|---|---|
| Reference: | Kawachi E, et al. (2005), Perego M & Hoch JA (1988) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| AbrB | Positive | ND | ND | ND |
Strauch MA, et al. (1989): GS |
| YbaL | Negative | ND | ND | ND |
Ogura M, et al. (2004): DB NB RG |
| SenS | Positive | ND | ND | ND |
Kawachi E, et al. (2005): DB RG NB |
| SigA | Promoter | -50:+10 | 1073745..1073804 | TATTAAAAAATTCTTACATTTTCATCTTTATTAATCTTTATTTTATTGGCATAATAGAGA |
Abe, S et al. (2009): PE |
|