Regulated Operon: htpG

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
htpG yxbB - 4089429..4091309
COG0326O  

Operon evidence: Northern blotting (1.9 kb transcript)
Reference: Schulz A, et al. (1997)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
unknown Positive -10:+17 4091330..4091356 AATAGATGCTGAAAAGGGTTTACATAA Versteeg S, et al. (2003): RG
SigA Promoter -41:+5 4091342..4091387 ATCTAATTGACAATTGTCATCTTATGTGATAAATAGATGCTGAAAA Schulz A, et al. (1997): PE NB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGGAATCGTCTCATAAGGAGACGATTCCTTTTTTTATAATGTA
     >>>>>>>>>>>     <<<<<<<<<<<
4089393..4089419
10..36
-21.4
htpG

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai