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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | htpG |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| htpG | yxbB | - | 4089429..4091309 | COG0326O |
| Operon evidence: | Northern blotting (1.9 kb transcript) |
|---|---|
| Reference: | Schulz A, et al. (1997) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| unknown | Positive | -10:+17 | 4091330..4091356 | AATAGATGCTGAAAAGGGTTTACATAA |
Versteeg S, et al. (2003): RG |
| SigA | Promoter | -41:+5 | 4091342..4091387 | ATCTAATTGACAATTGTCATCTTATGTGATAAATAGATGCTGAAAA |
Schulz A, et al. (1997): PE NB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGGAATCGTCTCATAAGGAGACGATTCCTTTTTTTATAATGTA >>>>>>>>>>> <<<<<<<<<<< |
htpG |
|