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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | katA |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| katA | kat-19 | - | 959535..960986 | COG0753P | katA-STA katX-BAC |
| Operon evidence: | Northern blotting (1.3 kb transcript) |
|---|---|
| Reference: | Nguyen TT, et al. (2009) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| PerR | Negative | ND | 961012..961069 | CTATTTTATAATAATTATAAAATAATATTGACTTTTTACTTAGAGATGATATTATGTT |
Herbig AF, et al. (2001): FT Engelmann S, et al. (1995): NB Bol DK & Yasbin RE (1994): RG HB PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAACCCGTTGTAGTCAGCGGGTTTTTTTATATTTAG >>>>>>> <<<<<<< |
katA |
|