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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | kinB-kapB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| kinB | + | 3230067..3231353 | COG0642T | |||
| kapB | + | 3231399..3231785 | kapB-STA |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Trach KA & Hoch JA (1993) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| AbrB | Negative | -34:-6 | 3230005..3230033 | TTTTACTTCTAATATTTAGTGTTATAATA |
Strauch MA, et al. (1995): FT |
| SigA | Promoter | -37:+7 | 3230002..3230045 | ATATTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTT |
Trach KA & Hoch JA (1993): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CATAACCCAGTCTGACAAAAGATTGGGTTTTTTACGTCGCGC >>>>>>>> <<<<<<<< |
kapB |
|