Regulated Operon: malA-yfiA-malP

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
malA glvA + 890022..891371
COG1486G x0958-STA  
yfiA glvR + 890771..891535

yfiA-STR  
malP yfiB + 892215..893798
COG1263G  

Operon evidence: Northern blotting (3.8 kb transcript)
Reference: Yamamoto H, et al. (2001), Genbank D50543
Comments: Readthrough terminator exists downstream of malA, leading to a 1.4 kb transcript.

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
CcpA Negative -7:+20 889989..890015 TGGAATTGTAAACGTTATCAAGGAGGT Yamamoto H, et al. (2001): RG PE SDM
YfiA Positive ND ND ND Yamamoto H, et al. (2001): RG PE
SigA Promoter -42:+5 889954..890000 AACGTGTTACGGGACGAGCTATCTCATGGTATAAATGGAATTGTAAA Yamamoto H, et al. (2001): PE NB RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
GACTGCCCTCCTTTTCGGGAGGGTTTTCGTTTGCCGTC
     >>>>>>>    <<<<<<<
893805..893822
7..24
-13.4
 malP

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai