Regulated Operon: mtnKA

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
ykrT mtnK - 1423241..1424440
COG4857R ykrT-BAC  
ykrS mtnS, mtnA - 1422172..1423233
COG0182J  

Operon evidence: lacZ assay; RT-PCR; downstream genes are on the opposite strand
Reference: Sekowska A, et al. (2001)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -49:+20 1424702..1424770 TTAAAAAATATATTGACAACTAACTAAATTACCTGTTACCATGTTCATCAACTGATAAATTAGAATTGT Sekowska A & Danchin A (2002): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TGCATTAAAAAACCGCTGGACTTTGCTCATTTGGAGCCGAGTCAGCGGTTTTTTTGTTTCTTT
            >>>>>>>>>>>>>>>>     <<<<<<<<<<<<<<<
1422132..1422167
5..40
-24.4
ykrS

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai