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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | natAB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| natA | + | 1062591..1063487 | COG4152R | |||
| natB | + | 1063480..1064739 | COG1668CP |
| Operon evidence: | Northern blotting (2.0 kb transcript) |
|---|---|
| Reference: | Cheng J, et al. (1997) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| NatR | Positive | -79:-33 | 296323..296368 | ATCCCATTTCACGACATAAAAAGAACTCTTCGCGACAACTTTATCC |
Ogura M, et al (2007): GS, FT |
| SigA | Promoter | -50:+10 | 296352..296411 | TCGCGACAACTTTATCCAACTAATCCAGCTTTTCGTATATAGTCATTACTAGAAATAAAG |
Ogura M, et al (2007): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CGAAAGGAGAAATACACTTTCTCCTTTTTGTATATCCTG >>>>>>> <<<<<<< |
natA |
|