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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | odhAB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| odhA | citK | - | 2108774..2111608 | COG0567C | odhA-BAC | |
| odhB | citM | - | 2107505..2108758 | COG0508C | odhB-BAC-1 odhB-BAC-2 odhB-STA citM-BAC |
| Operon evidence: | Northern blotting (4.3 kb transcript) |
|---|---|
| Reference: | Condon C, et al. (2002), Genbank M27141 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -48:+16 | 2111707..2111770 | TTTTTTACTATTTTGTGAACAATCAAGGTAGAATCAAATTGCAAACAGTGGTAAAATATCGTTG |
Resnekov O, et al. (1992): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGGGTACATCACGATAAAGTGATGTACCCTTTTTGATGCATATT >>>>>>>>>>> <<<<<<<<<<< |
odhB |
|