 |
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | opuBABCD |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| opuBA | proV | - | 3462105..3463250 | COG1125E | opuCA-BAC | |
| opuBB | proW | - | 3461435..3462088 | COG1174E | opuCB-BAC | |
| opuBC | proX | - | 3460503..3461423 | COG1732M | opuCC-BAC | |
| opuBD | proZ | - | 3459806..3460486 | COG1174E | opuCD-BAC |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Kappes RM, et al. (1999) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -42:+13 | 3463307..3463361 | GTAAACTTTTTATTTTATAAACTTTATTCTATAATGGGAAGCATTCAATTGTCTG |
Kappes RM, et al. (1999): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGAGGCTGGAGTCCAGCCTCTTTTTTCTCTTTAAA >>>>>>>> <<<<<<<< |
opuBD |
|