Regulated Operon: pbpF

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
pbpF ponA + 1083851..1085995
COG0744M pbpF-BAC  

Operon evidence: Northern blotting of downstream hemEHY operon
Reference: Hansson M & Hederstedt L (1992)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -49:+16 1083734..1083798 GCCACCTCCTGCTTGCTAGTATATCAAAACAATGGTATAAGTTTCTATTGGCGAGTGCTTCGAAC Popham DL, et al. (1993): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CAAAATTGTTTTCCTCTTAATGGAATTCGGCGATTTTTTGAACTTTGA
     >>>>>>>>>       <<<<<<<<<
1085981..1086005
-14..10
-6.3
pbpF

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai