Regulated Operon: ppiB

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
ppiB cypBS - 2435360..2435791
COG0652O x0745-BAC  

Operon evidence: Northern blotting (0.5 kb transcript); upstream and downstream gene are on the opposite strand
Reference: Herrler M, et al. (1994), Sorokin A, et al. (1993), Azevedo V, et al. (1993)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -47:+17 2435806..2435869 AGCCGCGACAAGGAGAGACAGGCTATAACCTATACATAATCTCCTTTGAAAATTAAAATAAAGA Herrler M, et al. (1994): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAGGCTTCCTCTTAGAGAGGAAGCTTTTTTTATTGGCCA
     >>>>>>>>>   <<<<<<<<<
2435325..2435345
15..35
-15.7
ppiB

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai