Regulated Operon: ptsGHI

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
ptsG crr + 1457187..1459286
COG1263G ptsG-BAC-1 ptsG-BAC-2 ptsG-STA ptsG-STR  
ptsH
+ 1459384..1459650
COG1925G ptsH-BAC ptsH-STA ptsH-STR  
ptsI
+ 1459650..1461362
COG1080G  

Operon evidence: Northern blotting (4.6 kb transcript)
Reference: Reizer J, et al. (1993), Gonzy-Treboul G, et al. (1989), Stulke J, et al. (1997), Ludwig H, et al. (2001)
Comments: Internal promoter in front of ptsH, leading to a 2.0 kb transcript.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
GlcT Positive ND ND ND Bachem S, et al. (1998): DB
SigA Promoter -37:+9 1459303..1459348 TGCTTGTCAGATGACAAGTACGGTTGTATGATATAATATTGTGAAG Stulke J, et al. (1997): RG NB PE
SigA Promoter -45:+7 1456807..1456858 TGTTGTTATTGAAAAATGAATATCCGCTATGCTACAATACAGCTTGGAAATT Stulke J, et al. (1997): RG NB PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAACCAGACGGCCTCCGGCCTGTCTGGTTTTTTTCATAAGTA
     >>>>>>>>>>   <<<<<<<<<<<
1461373..1461396
11..34
-17.9
ptsI

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai