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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | pucH |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| pucH | yunH | - | 3327247..3328587 | COG0044F |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Beier L, et al. (2002) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| PucR | Positive | -92:-52 | 3328706..3328746 | TCTATAAAAACATTGGTTAAGGTGAATAATTTTCAATAGGA |
Beier L, et al. (2002): DP |
| SigA | Promoter | -39:+5 | 3328650..3328693 | TTGCTGATGTAATACGATCATAGTAGCAGTAAACTGTTGAAAAT |
Beier L, et al. (2002): PE HM |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GTAAGCCCGGCGGATTTTACCGCCGGGTTTTTTGATTTCCTC >>>>>>>> <<<<<<<< |
pucH |
|