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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | qcrABC |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| qcrA | petC | - | 2364589..2365092 | COG0723C | qcrA-BAC | |
| qcrB | petB | - | 2363913..2364587 | COG1290C | ||
| qcrC | petD | - | 2363111..2363878 | COG1290C | qcrC-BAC |
| Operon evidence: | Northern blotting (2.0 kb transcript) |
|---|---|
| Reference: | Yu J, et al. (1995) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| ResD | Positive | ND | ND | ND |
Sun G, et al. (1996): DB HB |
| SigA | Promoter | -39:+6 | 2365155..2365199 | TATATTGACCTTGCTGAGAGATTCATATATTATGAGGGTGTCTAG |
Yu J, et al. (1995): PE HM |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CAAAAGCTGACCCGGCGTCAGCTTTTTTATATGGACA >>>>>> <<<<<< |
qcrC |
|