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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | rbsRKDACB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| rbsR | + | 3701411..3702391 | COG1609K | |||
| rbsK | + | 3702393..3703274 | COG0524G | rbsK-BAC | ||
| rbsD | + | 3703271..3703666 | COG1869G | |||
| rbsA | + | 3703682..3705163 | COG1129G | rbsA-BAC | ||
| rbsC | + | 3705165..3706133 | COG1172G | |||
| rbsB | + | 3706145..3707062 | COG1879G | rbsB-BAC |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Woodson K & Devine KM (1994) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| AbrB | Positive | -133:-67 | 3701237..3701313 | GAAATCTTCATCCATATTTGTGAAGACTTTGTCAAAAAAAGAGTGAAAACCTTAAATTTTTCAATTATATATACAAT |
Strauch MA, et al. (1995): DB FT |
| AbrB | Positive | -4:+29 | 3701375..3701407 | CTATGTAAACGGTTACATAAACAAGGAGGAGCT |
Strauch MA, et al. (1995): DB FT |
| CcpA | Negative | -11:+23 | 3701368..3701401 | AATCTATCTATGTAAACGGTTACATAAACAAGGA |
Woodson K, et al. (1994): PE |
| SigA | Promoter | -49:+18 | 3701330..3701396 | TTTGATATTTTTATTGCTAACTTCGGATTGTTCATGATAATCTATCTATGTAAACGGTTACATAAAC |
O'Reilly M, et al. (1994): PE |
|