Regulated Operon: rpsD

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
rpsD
+ 3035730..3036332
COG0522J rpsD-BAC rpsD-CLO rpsD-STA  

Operon evidence: Northern blotting (0.8 kb transcript)
Reference: Grundy FJ & Henkin TM (1990)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -47:+17 3035501..3035564 TGGAGGAATGGTTGACTTCAAAACAAATAAATTATATAATGACCTTTGTGTGAAATATTGCAGC Grundy FJ, et al. (1990): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAACCCCTGCCGCTATGCGGTCGGGGTTTTTTTATCGGCTT
     >>>>>>>>>>   <<<<<<<<<<
3036345..3036367
13..35
-17.3
rpsD

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai