Regulated Operon: sbcD-yirY-yisB

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
sbcD yixA + 1143577..1144752
COG0420L x1499-BAC x1593-STA  
yirY
+ 1144054..1147446

 
yisB
+ 1148155..1148457

 

Operon evidence: Genome analysis
Reference:
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
ComK Positive ND ND ND Ogura M, et al. (2002): AR RG DB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TGACTAAAAAGCAGCCCTCTCTTTGCAGAGCGGCTGCTTTTATCCGTTTCCA
          >>>>>>>>>>      <<<<<<<<<<<
1148465..1148491
8..34
-17.6
yisB

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai