Regulated Operon: smf

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
smf
+ 1681880..1682773 DNA processing Smf protein homolog
smf-STR  

Operon evidence: Genome analysis
Reference:
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
ComK Positive ND 1682487..1682503 AAGAACTTGTTCGAAAC Ogura M, et al. (2002): AR RG HM DB
ComK Positive ND 1682503..1682520 CTTGTAAAACGCATTAAT Ogura M, et al. (2002): AR RG HM DB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
ACAAACGGTATTGTAATATTTAATAATAGTGAGGATTTAAAGTTGCATATTGTTTTCTATTTAATTA
     >>>>>>>>>>>>>>>>>>>          <<<<<<<<<<<<<<<<<<
1683490..1683536
717..763
-8.6
 smf

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai