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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | spoIIIE |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| spoIIIE | + | 1752272..1754641 | COG1674D | spoIIIE-BAC x0258-STA |
| Operon evidence: | Northern blotting (2.5 kb transcript) |
|---|---|
| Reference: | Butler PD & Mandelstam J (1987) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -41:+3 | 1752152..1752195 | CCAACCCTTTTTTAAGGGCAAAATATGCTATAATAGGGGAATCC |
Foulger D & Errington J (1989): PE RG |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GAAATATGATGAGCTCTCTTCTTAATGAAGGGAGTTCCGCTTTCTATAGTTGTCA >>>>>>>>>>> <<<<<<<<<<< |
spoIIIE |
|