Regulated Operon: sunT-bdbA-yolJ-bdbB

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
sunT yolH - 2267346..2269463
COG2274V  
bdbA yolI - 2266936..2267349
COG3118O  
yolJ
- 2265668..2266936
COG0463M  
bdbB yolK - 2265225..2265671
COG1495O  

Operon evidence: Northern blotting (4.3 kb transcript)
Reference: Serizawa M, et al. (2005)
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
Rok Negative ND ND ND Albano M, et al. (2005): RG AR DB
YvrH Positive ND ND ND Serizawa M, et al. (2005): NB DB AR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
TTACACAGGTAATCCGAAAAAAGCTATTTAAACAAGTTCTCTTTTTTTAGAACTTGTTTTTGTTTTTTTCC
     >>>>>>>>>>>>>>>>>>>>>>>>    <<<<<<<<<<<<<<<<<<<<<<<
2265137..2265187
38..88
-13.1
 bdbB

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai