Regulated Operon: | thyB-dfrA-ypkP |
Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
---|---|---|---|---|---|---|
thyB | - | 2297106..2297900 | COG0207F | |||
dfrA | tmp | - | 2296603..2297109 | COG0262H | dfrA-BAC | |
ypkP | - | 2295982..2296602 |
Operon evidence: | Genome analysis |
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Reference: | |
Comments: |
Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
---|---|---|---|---|---|
YqzB | Positive | -55:+1 | 2297924..2297981 | ATAAAAAAATCATTTCTGGGTTCAGAAATGATTTTTTATTGTGTTACACTACTAGAAG |
Eckart RA, et al. (2009): RG, FT |
SigA | Promoter | -55:+10 | 2297915..2297981 | ATAAAAAAATCATTTCTGGGTTCAGAAATGATTTTTTATTGTGTTACACTACTAGAAGACTACTTTT |
Eckart RA, et al. (2009): |
Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
---|---|---|---|---|
TACGTGCATAAAAAAGCGCAGTCGTGAAGACTGCGCTTTTCTGTTACTGTT >>>>>>>> <<<<<<<< |
ypkP |
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