Regulated Operon: ycgT

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
ycgT
+ 352858..353868
COG0492O x0466-BAC  

Operon evidence: Northern blotting (1.4 kb transcript)
Reference: BSORF
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
Fur Negative ND 352789..352829 GATATACTTTGTATTGATATTCATTCTCAATTAAAACTTTG Ollinger J, et al. (2006): DB 2D-PAGE RG GS HM

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAGGGCTGCTTGCCATCAGGTGTGAAGGAGTTTTTTCTCTGCATG
     >>>>>>>>>    <<<<<<<<<
353890..353911
22..43
-6.0
ycgT

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai