Regulated Operon: yclNOPQ

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yclN
+ 432372..433322
COG4606P yclN-BAC  
yclO
+ 433315..434262
COG4605P  
yclP
+ 434256..435014
COG4604P  
yclQ
+ 435036..435989
COG4607P  

Operon evidence: Genome analysis
Reference: Baichoo N, et al. (2002)
Comments: Northern blotting results in BSORF show a yclNOPQ (3.6 kb), a yclOPQ (2.6 kb), a yclPQ (1.7 kb), and a yclQ (1.0 kb) transcript.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
Fur Negative ND 432263..432312 GGTAATATGTAAATGATAATGATAATCAATTACTATATGGCCATATTGTT Baichoo N, et al. (2002): FT
Ollinger J, et al. (2006): DB SDS-PAGE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGAGCCTCCGCTAAATAGCGGGGCTCTTTTTTTGTTAATCA
     >>>>>>>>>>>    <<<<<<<<<<
435999..436023
10..34
-19.1
yclQ

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai